Training - GC basic problem solving

General strategy for GC problems

Problem solving advice
  • It is much easier and cheaper to prevent problems than to fix them
  • Consider the instrument as three units: injector, column and detector
  • Attempt to isolate the problem unit
  • Adopt a logical approach
  • Write everything down
If you have persistent problems
  • Get a second opinion
  • Seek advice
  • Recheck everything
  • Remember the simple and obvious

Problem area 1 - Injector

Injector advice
  • Do not heat until purged with oxygen- free gas (10 volumes)
  • Always note injector and detector ends
  • Always cut end of column after passing through ferrule
  • Consider column dimensions and phase
  • Consider the use of pre-column
  • Set correct flow rate using linear carrier gas velocity
  • Do not overheat column unnecessarily
  • Use good quality ferrules and change as needed
  • Support the column cage in the oven
Carrier gas
  • always use high quality gases
  • use and regularly change gas filters
  • use good quality cleaned tubing
Septa
  • choose high quality low bleed septa
  • change septa regularly
  • consider tip style of syringe needle
Syringe
  • use the correct one for the injector
  • clean the syringe regularly
  • never inject less than 20% full scale
Inlet liner
  • consider inlet liner design
  • change inlet liner regularly
Other items to consider
  • column connection
  • injection technique
  • injection temperature
  • solvent used
  • split flow
  • splitless time

Problem area 2 - Column

Column advice
  • Do not heat until purged with oxygen-free gas (10 volumes)
  • Always note injector and detector ends
  • Always cut end of column after passing through ferrule
  • Consider column dimensions and phase
  • Consider the use of pre-column
  • Set correct flow rate using linear carrier gas velocity
  • Do not overheat column unnecessarily
  • Use good quality ferrules and change as needed
  • Support the column cage in the oven
Things that can deteriorate your column
  • Very large volume injections
  • Dirty samples
  • Very acidic/basic samples
  • Poor gas management
  • Overheating
Restoring your column
  • Remove 50 cm to 1 m from the injector end of the column
  • Turn the column around and re-condition it
  • Wash the column
Chromatograms showing the effect of conditioning

Compounds:
1. Decane
2. 4-Chlorophenol
3. Decylamine
4. Undecanol
5. Biphenyl
6. Pentadecane

Reference run using BPX5 GC column

Reference run using BPX5 GC column

Carrier gas has been turned off at 300°C for 2 hours

Carrier gas has been turned off at 300°C for 2 hours

After reconditioning for 2 hours

After reconditioning for 2 hours

After further reconditioning at 370° C for 6 hrs

After further reconditioning at 370° C for 6 hrs

Reference run using BPX5 GC column

Reference run using BPX5 GC column

Column conditioning

Choose a conditioning temperature 20°C above your method temperature, or choose the Maximum Specified Temperature - whichever is the lower.

Remember: the lower the temperature, the longer your column will last.

Column storage
  • Store the column so it can’t be scratched
  • Seal the column ends (with septa)

Problem area 3 - Detector

Detector advice
  • Regularly check and adjust gas flows
  • Periodically clean the detector
  • Consider detector temperature
  • Ensure correct positioning of column in detector
  • Do not push column into FID flame.